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ERX9737746: Illumina HiSeq 2500 sequencing; Raw reads: P8403_409
1 ILLUMINA (Illumina HiSeq 2500) run: 9.6M spots, 491.6M bases, 175.1Mb downloads

Design: unspecified
Submitted by: Swedish University of Agricultural Sciences
Study: Sequencing of sRNAs from oomycetes species with different lifestyles, inluding plant pathogens and biocontrol organisms
show Abstracthide Abstract
Small RNAs were sequenced from the oomycetes Lagenidium giganteum, Phytophthora cactorum, Ph. colocasiae, Ph plurivora, Pythium oligandrum and Py. periplocum. Their characteristics, including 5' prime preference, length and mapping sites, were analysed and used to formulate the hypotheses regarding the role of RNA silencing in the respective organisms. Clonostachys rosea sRNAs were used as outgroup.
Sample: P8403_409
SAMEA111348564 • ERS13446111 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM PCR
Layout: SINGLE
Runs: 1 run, 9.6M spots, 491.6M bases, 175.1Mb
Run# of Spots# of BasesSizePublished
ERR102023759,638,394491.6M175.1Mb2022-11-26

ID:
25412698

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